QB Issue Resolution:

You don’t do it on the Payment screen: “I do not have a second line to enter the use fee as -$2.00 on payment screen.”

It is part of Bank Deposit. You lost the fee, but the customer paid in full. The Payment is the gross, $100. The Net to Banking deposit is reduced by the fee you incurred.

I attached an example of a Bank Fee entry.

Resolution for Issue 'Can you please explain how to enter credit card use fee when receiving payment?' available: Yes (Solved).
Source: Intuit Community forum.

Can you please explain how to enter credit card use fee when receiving payment?: this issue or error code is a known issue in Quickbooks Online (QBO) and/or Quickbooks. Support for this issue is available either by self-service or paid support options. Experts are available to resolve your Quickbooks issue to ensure minimal downtime and continue running your business. First try to resolve the issue yourself by looking for a resolution described below. If it is a complex issue or you are unable to solve the issue, you may contact us by clicking here or by using other support options.

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