QB Issue Resolution:

Create a customer credit memo and post the 15 to proper expense. Apply c.m. to invoice.

Create a customer credit memo and post the 15 to proper expense. Apply c.m. to invoice.

Resolution for Issue 'Customer deducts $15 expense from invoice. How to record this as invoice paid, yet the expense amount taken off the deposit and recorded in the correct expense account?' available: Yes (Solved).
Source: Intuit Community forum.

Customer deducts $15 expense from invoice. How to record this as invoice paid, yet the expense amount taken off the deposit and recorded in the correct expense account?: this issue or error code is a known issue in Quickbooks Online (QBO) and/or Quickbooks. Support for this issue is available either by self-service or paid support options. Experts are available to resolve your Quickbooks issue to ensure minimal downtime and continue running your business. First try to resolve the issue yourself by looking for a resolution described below. If it is a complex issue or you are unable to solve the issue, you may contact us by clicking here or by using other support options.

Support for amount taken
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Error Recovery for amount taken [Canada]
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