QB Issue Resolution:

To delete the extra pay type select your Employees tab and then the employee you’re working with. Select the blue pencil next to the Pay option. Select Add additional pay types and unselect the pay type you’re getting rid of and select Done. This will take the pay type off so that it no longer shows up on the paychecks.

Resolution for Issue 'How do I delete a pay type I added under YOu can also Pay employee:' available: Yes (Solved).
Source: Intuit Community forum.

How do I delete a pay type I added under YOu can also Pay employee:: this issue or error code is a known issue in Quickbooks Online (QBO) and/or Quickbooks. Support for this issue is available either by self-service or paid support options. Experts are available to resolve your Quickbooks issue to ensure minimal downtime and continue running your business. First try to resolve the issue yourself by looking for a resolution described below. If it is a complex issue or you are unable to solve the issue, you may contact us by clicking here or by using other support options.

Support for additional pay types
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Error Recovery for additional pay types [Canada]
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