QB Issue Resolution:

hand write the check, payable to the owner, but use the correct expense account. be sure to get the original receipt for the purchase for the company records

Resolution for Issue 'How do I reimburse an owner (who is not an employee) and show that the vendor bill has been paid?' available: Yes (Solved).
Source: Intuit Community forum.

How do I reimburse an owner (who is not an employee) and show that the vendor bill has been paid?: this issue or error code is a known issue in Quickbooks Online (QBO) and/or Quickbooks. Support for this issue is available either by self-service or paid support options. Experts are available to resolve your Quickbooks issue to ensure minimal downtime and continue running your business. First try to resolve the issue yourself by looking for a resolution described below. If it is a complex issue or you are unable to solve the issue, you may contact us by clicking here or by using other support options.

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