QB Issue Resolution:

Intuit employees have posted here that Intuit is aware of the problem and it will be fixed in an update on or before June 25 (barring problems).

Resolution for Issue 'My custom reports are all missing. I need them back.' available: Yes (Solved).
Source: Intuit Community forum.

My custom reports are all missing. I need them back.: this issue or error code is a known issue in Quickbooks Online (QBO) and/or Quickbooks. Support for this issue is available either by self-service or paid support options. Experts are available to resolve your Quickbooks issue to ensure minimal downtime and continue running your business. First try to resolve the issue yourself by looking for a resolution described below. If it is a complex issue or you are unable to solve the issue, you may contact us by clicking here or by using other support options.

Support for barring problems
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