QB Issue Resolution:

You can go through the 1099 E-File Service as many times as you like for additional 1099s. Each time you go through, the system will look at how much you’ve already paid and figure out how much is owed for the new forms. For example, the minimum charge is $14.99 for 3 forms. So if you initially filed 2 forms and paid $14.99, then if you came back through with one more form there would be no additional charge. After 3 forms, there is a charge of $3.99 for each additional form, so you would be charged at that rate as you add more forms. There is no additional charge after 20 forms, so once you pass that number, you can come through multiple times with additional form without being charged.

Resolution for Issue 'Oops…forgot a 1099MISC With QB.Can we add it without an additional fee?' available: Yes (Solved).
Source: Intuit Community forum.

Oops…forgot a 1099MISC With QB.Can we add it without an additional fee?: this issue or error code is a known issue in Quickbooks Online (QBO) and/or Quickbooks. Support for this issue is available either by self-service or paid support options. Experts are available to resolve your Quickbooks issue to ensure minimal downtime and continue running your business. First try to resolve the issue yourself by looking for a resolution described below. If it is a complex issue or you are unable to solve the issue, you may contact us by clicking here or by using other support options.

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