QB Issue Resolution:

You can use any account when creating the invoice to record a 100% VAT transaction, as you would use the same account on both lines at 0.01p and -0.01p to net 0.00 so this will not impact the account.

 

The account that this posts to will be the income account chosen on the product/service – you can choose the p/s for the original sales or create new.

 

The VAT amount which you enter into the ‘VAT @ 20% on 0.01’ line will post to the VAT control account and box 1 of the VAT return. You can view the full transaction journal of the invoice by going to more > transaction journal.

 

 

Resolution for Issue 'VAT not charged in past invoices' available: Yes (Solved).
Source: Intuit Community forum.

VAT not charged in past invoices: this issue or error code is a known issue in Quickbooks Online (QBO) and/or Quickbooks. Support for this issue is available either by self-service or paid support options. Experts are available to resolve your Quickbooks issue to ensure minimal downtime and continue running your business. First try to resolve the issue yourself by looking for a resolution described below. If it is a complex issue or you are unable to solve the issue, you may contact us by clicking here or by using other support options.

Support for income account
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Error Recovery for income account [Canada]
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