QB Issue Resolution:
All you have to do is select ONLY the employee you’re paying this week when you Run Payroll.
When you run payroll, you’re given a list of employees to run it for. Simply select only the employee/employees who are getting a check today.
Resolution for Issue 'We have 2 employees, one will not receive a paycheck this week and the other will. How do I run the payroll for the one not receiving a check? Make everything 0?' available: Yes (Solved).
Source: Intuit Community forum.
We have 2 employees, one will not receive a paycheck this week and the other will. How do I run the payroll for the one not receiving a check? Make everything 0?: this issue or error code is a known issue in Quickbooks Online (QBO) and/or Quickbooks. Support for this issue is available either by self-service or paid support options. Experts are available to resolve your Quickbooks issue to ensure minimal downtime and continue running your business. First try to resolve the issue yourself by looking for a resolution described below. If it is a complex issue or you are unable to solve the issue, you may contact us by clicking here or by using other support options.Support for Other
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Error Recovery for Other [Canada]
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